*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-Wheat, Physical, R Genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Physical-RGenes-6B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - Wheat, Physical, R Genes [ View Map Set Info ]
Map Name: Ta-Physical-RGenes-6B
Map Start: -200
Map Stop: 100
Features by Type:
18 breakpoint
17 breakpointinterval
17 locus
52 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 52.       of 3 | Next
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Centromere-6B locus 0 Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-6B Centromere-6B locus 60.8 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-6B Centromere-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Grandin x BR34 - Ta-Grandin/BR34-6B Centromere-6B locus 73.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-6B Centromere-6B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-6B Centromere-6B locus 148.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-6B Centromere-6B locus 54.3 - 57 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-6B Centromere-6B locus 51 () Automated name-based View Maps
Wheat AB - T. turgidum, durum x dicoccoides - Tturgidum-Du-6B Centromere-6B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-6B Centromere-6B locus 35 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-6B Centromere-6B locus 0 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-6B Centromere-6B locus 49.9 () Automated name-based View Maps
Wheat AB - Durum wheat, Svevo x Ciccio - Svevo/Ciccio-6B Centromere-6B locus 82.1 () Automated name-based View Maps
Wheat ABD - Wheat, Forno x Oberkulmer - Triticum-FxO-6B Centromere-6B locus 35 () Automated name-based View Maps
Wheat AB - T. turgidum, Omrabi5 x dicoccoides, QTL - Tt-Oxd-QTL-6B Centromere-6B locus 135 () Automated name-based View Maps
Xunl119a locus 31 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5B Xunl119a locus 60 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-5D Xunl119a locus 54 () Automated name-based View Maps
Xunl127 locus -50 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Xunl127 locus -66 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A Xunl127 locus -50 () Automated name-based View Maps
Xunl122 locus -50 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A Xunl122 locus -50 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Xunl122 locus -66 () Automated name-based View Maps
Xunl105 locus 38 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Xunl105 locus 38 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A Xunl105 locus 63 () Automated name-based View Maps
XBE500158 locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBE500158 locus 88 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A XBE500158 locus 95 () Automated name-based View Maps
XBF199778 locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBF199778 locus 88 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A XBF199778 locus 95 () Automated name-based View Maps
XBE403251a locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBE403251a locus 88 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A XBE403251a locus 95 () Automated name-based View Maps
XBE426789a locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A XBE426789a locus 95 () Automated name-based View Maps
XBE426790a locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6A XBE426790a locus 95 () Automated name-based View Maps
XBG607637 locus -120 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBG607637 locus -99 () Automated name-based View Maps
XBF200008b locus -93 No other positions
XBF478914 locus -93 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBF478914 locus -99 () Automated name-based View Maps
XBM137173 locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBM137173 locus 88 () Automated name-based View Maps
XBE405507b locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D XBE405507b locus 88 () Automated name-based View Maps
Xunl154 locus 90 Wheat ABD - Wheat, Physical, R Genes - Ta-Physical-RGenes-6D Xunl154 locus 88 () Automated name-based View Maps
Xunl194a locus 90 No other positions
6BS-1.05-2.00 breakpointinterval -200 - -105 No other positions
6BS-0.83-1.02 breakpointinterval -102 - -83 No other positions
6BS-0.25-0.76 breakpointinterval -76 - -25 No other positions
C-6BS-0.25 breakpointinterval -25 - 0 No other positions
C-6BL-0.05 breakpointinterval 0 - 5 No other positions
6BL-0.26-0.36 breakpointinterval 26 - 36 No other positions
6BL-0.36-0.40 breakpointinterval 36 - 40 No other positions
6BL-0.79-1.00 breakpointinterval 79 - 100 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.